vhica: Vertical and Horizontal Inheritance Consistence Analysis

The "Vertical and Horizontal Inheritance Consistence Analysis" method is described in the following publication: "VHICA: a new method to discriminate between vertical and horizontal transposon transfer: application to the mariner family within Drosophila" by G. Wallau. et al. (2016) <doi:10.1093/molbev/msv341>. The purpose of the method is to detect horizontal transfers of transposable elements, by contrasting the divergence of transposable element sequences with that of regular genes.

Version: 0.2.7
Suggests: ape, plotrix, parallel, seqinr, gtools
Published: 2020-03-02
Author: Arnaud Le Rouzic
Maintainer: Arnaud Le Rouzic <lerouzic at egce.cnrs-gif.fr>
License: GPL-2
NeedsCompilation: no
CRAN checks: vhica results


Reference manual: vhica.pdf


Package source: vhica_0.2.7.tar.gz
Windows binaries: r-devel: vhica_0.2.7.zip, r-release: vhica_0.2.7.zip, r-oldrel: vhica_0.2.7.zip
macOS binaries: r-release (arm64): vhica_0.2.7.tgz, r-oldrel (arm64): vhica_0.2.7.tgz, r-release (x86_64): vhica_0.2.7.tgz, r-oldrel (x86_64): vhica_0.2.7.tgz
Old sources: vhica archive


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