geneHapR: Gene Haplotype Statistics, Phenotype Association and Visualization

Import genome variants data and perform gene haplotype Statistics, visualization and phenotype association with 'R'.

Version: 1.1.5
Depends: ggplot2, R (≥ 4.0.0)
Imports: ape, Biostrings, ggpubr, genetics, GenomicRanges, maps, methods, IRanges, pegas, reshape2, rlang, rtracklayer, trackViewer, shiny, shinyjs, stats, stringdist, stringr, tibble, tidyr, utils, vcfR
Suggests: mapdata, maptools, muscle, knitr, rmarkdown
Published: 2022-12-07
Author: Zhang Renliang [aut, cre], Jia Guanqing [aut]
Maintainer: Zhang Renliang <zhang_renliang at 163.com>
License: GPL-3
NeedsCompilation: no
CRAN checks: geneHapR results

Documentation:

Reference manual: geneHapR.pdf
Vignettes: Introduction of 'geneHapR'
'geneHapR' data
geneHapR workflow

Downloads:

Package source: geneHapR_1.1.5.tar.gz
Windows binaries: r-devel: geneHapR_1.1.5.zip, r-release: geneHapR_1.1.5.zip, r-oldrel: geneHapR_1.1.1.zip
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available
Old sources: geneHapR archive

Linking:

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