CRAN Package Check Results for Maintainer ‘Robrecht Cannoodt <rcannood at gmail.com>’

Last updated on 2021-12-09 07:50:53 CET.

Package ERROR NOTE OK
anndata 14
babelwhale 14
diffusionMap 14
dyndimred 12 2
dynfeature 6 8
dyngen 2 12
dynparam 12 2
dynplot 14
dynutils 14
dynwrap 2 12
GillespieSSA 12 2
GillespieSSA2 4 10
lmds 13 1
princurve 14
qsub 14
SCORPIUS 14

Package anndata

Current CRAN status: OK: 14

Package babelwhale

Current CRAN status: OK: 14

Package diffusionMap

Current CRAN status: OK: 14

Package dyndimred

Current CRAN status: NOTE: 12, OK: 2

Version: 1.0.4
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-devel-windows-x86_64-old, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Package dynfeature

Current CRAN status: NOTE: 6, OK: 8

Version: 1.0.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘magrittr’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-TK, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Package dyngen

Current CRAN status: ERROR: 2, OK: 12

Version: 1.0.3
Check: tests
Result: ERROR
     Running ‘testthat.R’ [12s/17s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     >
     > test_check("dyngen")
     Loading required package: dyngen
     R(95911,0x7fffaf4e7380) malloc: *** error for object 0x7fcef8223798: incorrect checksum for freed object - object was probably modified after being freed.
     *** set a breakpoint in malloc_error_break to debug
Flavor: r-release-macos-x86_64

Version: 1.0.3
Check: tests
Result: ERROR
     Running ‘testthat.R’ [12s/15s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     34: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { })
     35: test_code(NULL, exprs, env)
     36: source_file(path, child_env(env), wrap = wrap)
     37: FUN(X[[i]], ...)
     38: lapply(test_paths, test_one_file, env = env, wrap = wrap)
     39: doTryCatch(return(expr), name, parentenv, handler)
     40: tryCatchOne(expr, names, parentenv, handlers[[1L]])
     41: tryCatchList(expr, classes, parentenv, handlers)
     42: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
     43: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, wrap = wrap))
     44: test_files(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, wrap = wrap, load_package = load_package)
     45: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, wrap = wrap, load_package = load_package, parallel = parallel)
     46: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
     47: test_check("dyngen")
     An irrecoverable exception occurred. R is aborting now ...
Flavor: r-oldrel-macos-x86_64

Package dynparam

Current CRAN status: NOTE: 12, OK: 2

Version: 1.0.2
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-devel-windows-x86_64-old, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Package dynplot

Current CRAN status: OK: 14

Package dynutils

Current CRAN status: OK: 14

Package dynwrap

Current CRAN status: NOTE: 2, OK: 12

Version: 1.2.2
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘hdf5r’
Flavors: r-release-macos-arm64, r-release-macos-x86_64

Package GillespieSSA

Current CRAN status: NOTE: 12, OK: 2

Version: 0.6.1
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-devel-windows-x86_64-old, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Package GillespieSSA2

Current CRAN status: NOTE: 4, OK: 10

Version: 0.2.8
Check: installed package size
Result: NOTE
     installed size is 5.0Mb
     sub-directories of 1Mb or more:
     doc 1.6Mb
     libs 2.8Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Package lmds

Current CRAN status: NOTE: 13, OK: 1

Version: 0.1.0
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-devel-windows-x86_64-old, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 0.1.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘Matrix’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-TK, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Package princurve

Current CRAN status: OK: 14

Package qsub

Current CRAN status: OK: 14

Package SCORPIUS

Current CRAN status: OK: 14