CRAN Package Check Results for Package mlr3spatiotempcv

Last updated on 2024-11-03 19:48:41 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.3.1 16.72 254.39 271.11 NOTE
r-devel-linux-x86_64-debian-gcc 2.3.1 0.75 1.69 2.44 ERROR
r-devel-linux-x86_64-fedora-clang 2.3.1 465.11 OK
r-devel-linux-x86_64-fedora-gcc 2.3.1 450.12 OK
r-devel-windows-x86_64 2.3.1 19.00 208.00 227.00 NOTE
r-patched-linux-x86_64 2.3.1 22.67 240.28 262.95 OK
r-release-linux-x86_64 2.3.1 17.13 124.42 141.55 ERROR
r-release-macos-arm64 2.3.1 135.00 OK
r-release-macos-x86_64 2.3.1 177.00 OK
r-release-windows-x86_64 2.3.1 18.00 208.00 226.00 OK
r-oldrel-macos-arm64 2.3.1 134.00 OK
r-oldrel-macos-x86_64 2.3.1 246.00 OK
r-oldrel-windows-x86_64 2.3.1 22.00 270.00 292.00 OK

Check Details

Version: 2.3.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: TaskClassifST.Rd: Task, TaskSupervised, DataBackend, DataBackendDataTable, convert_task TaskRegrST.Rd: Task, TaskSupervised, DataBackend, DataBackendDataTable, convert_task as_task_classif_st.Rd: DataBackend, TaskRegr, convert_task as_task_regr_st.Rd: DataBackend, TaskClassif, convert_task autoplot.ResamplingCV.Rd: ResamplingCV, ResamplingRepeatedCV autoplot.ResamplingCustomCV.Rd: ResamplingCustomCV autoplot.ResamplingSpCVBlock.Rd: ggplot mlr_resamplings_repeated_spcv_block.Rd: Task mlr_resamplings_repeated_spcv_coords.Rd: Task mlr_resamplings_repeated_spcv_disc.Rd: Task mlr_resamplings_repeated_spcv_env.Rd: Task mlr_resamplings_repeated_spcv_knndm.Rd: Task mlr_resamplings_repeated_spcv_tiles.Rd: Task mlr_resamplings_repeated_sptcv_cstf.Rd: Task mlr_resamplings_spcv_block.Rd: Task mlr_resamplings_spcv_buffer.Rd: Task mlr_resamplings_spcv_coords.Rd: Task mlr_resamplings_spcv_disc.Rd: Task mlr_resamplings_spcv_env.Rd: Task mlr_resamplings_spcv_knndm.Rd: Task mlr_resamplings_spcv_tiles.Rd: Task mlr_resamplings_sptcv_cstf.Rd: Task mlr_tasks_cookfarm_mlr3.Rd: TaskRegr, Task, mlr_tasks mlr_tasks_diplodia.Rd: TaskClassif, Task, mlr_tasks mlr_tasks_ecuador.Rd: TaskClassif, Task, mlr_tasks Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-windows-x86_64

Version: 2.3.1
Check: whether package can be installed
Result: ERROR Installation failed. Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.3.1
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'blockCV', 'caret', 'CAST', 'ggtext', 'mlr3spatial', 'plotly', 'sf', 'terra' Flavor: r-release-linux-x86_64

Version: 2.3.1
Check: examples
Result: ERROR Running examples in ‘mlr3spatiotempcv-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: mlr_resamplings_repeated_spcv_knndm > ### Title: (CAST) Repeated K-fold Nearest Neighbour Distance Matching > ### Aliases: mlr_resamplings_repeated_spcv_knndm > ### ResamplingRepeatedSpCVKnndm > > ### ** Examples > > library(mlr3) > library(mlr3spatial) Error in library(mlr3spatial) : there is no package called ‘mlr3spatial’ Execution halted Flavor: r-release-linux-x86_64

Version: 2.3.1
Check: tests
Result: ERROR Running ‘testthat.R’ [29s/18s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > if (requireNamespace("testthat", quietly = TRUE)) { + library("checkmate") + library("testthat") + library("mlr3spatiotempcv") + test_check("mlr3spatiotempcv") + } Loading required package: mlr3 Starting 2 test processes [ FAIL 11 | WARN 1 | SKIP 74 | PASS 1029 ] ══ Skipped tests (74) ══════════════════════════════════════════════════════════ • CAST cannot be loaded (3): 'test-ResamplingRepeatedSpCVKnndm.R:1:1', 'test-ResamplingSpCVKnndm.R:2:3', 'test-ResamplingSpCVKnndm.R:23:3' • On Linux (2): 'test-2-autoplot.R:8:3', 'test-2-autoplot.R:54:3' • blockCV cannot be loaded (54): 'test-1-autoplot.R:205:3', 'test-1-autoplot.R:236:3', 'test-1-autoplot.R:266:3', 'test-1-autoplot.R:293:3', 'test-1-autoplot.R:324:3', 'test-1-autoplot.R:355:3', 'test-ResamplingRepeatedSpCVBlock.R:2:3', 'test-ResamplingRepeatedSpCVBlock.R:12:3', 'test-ResamplingRepeatedSpCVBlock.R:22:3', 'test-ResamplingRepeatedSpCVBlock.R:32:3', 'test-ResamplingRepeatedSpCVBlock.R:42:3', 'test-ResamplingRepeatedSpCVBlock.R:53:3', 'test-ResamplingRepeatedSpCVBlock.R:62:3', 'test-ResamplingRepeatedSpCVBlock.R:70:3', 'test-ResamplingRepeatedSpCVBlock.R:114:3', 'test-ResamplingRepeatedSpCVBuffer.R:2:3', 'test-ResamplingRepeatedSpCVBuffer.R:13:3', 'test-ResamplingRepeatedSpCVBuffer.R:24:3', 'test-ResamplingRepeatedSpCVBuffer.R:35:3', 'test-ResamplingRepeatedSpCVBuffer.R:46:3', 'test-ResamplingRepeatedSpCVBuffer.R:54:3', 'test-ResamplingRepeatedSpCVBuffer.R:62:3', 'test-ResamplingRepeatedSpCVEnv.R:2:3', 'test-ResamplingRepeatedSpCVEnv.R:13:3', 'test-ResamplingRepeatedSpCVEnv.R:24:3', 'test-ResamplingRepeatedSpCVEnv.R:34:3', 'test-ResamplingRepeatedSpCVEnv.R:48:3', 'test-ResamplingRepeatedSpCVEnv.R:56:3', 'test-ResamplingSpCVBlock.R:2:3', 'test-ResamplingSpCVBlock.R:12:3', 'test-ResamplingSpCVBlock.R:21:3', 'test-ResamplingSpCVBlock.R:32:3', 'test-ResamplingSpCVBlock.R:44:3', 'test-ResamplingSpCVBlock.R:51:3', 'test-ResamplingSpCVBuffer.R:2:3', 'test-ResamplingSpCVBuffer.R:12:3', 'test-ResamplingSpCVBuffer.R:22:3', 'test-ResamplingSpCVBuffer.R:32:3', 'test-ResamplingSpCVBuffer.R:43:3', 'test-ResamplingSpCVBuffer.R:54:3', 'test-ResamplingSpCVBuffer.R:69:3', 'test-ResamplingSpCVBuffer.R:78:3', 'test-ResamplingSpCVBuffer.R:87:3', 'test-ResamplingSpCVBuffer.R:96:3', 'test-ResamplingSpCVEnv.R:2:3', 'test-ResamplingSpCVEnv.R:12:3', 'test-ResamplingSpCVEnv.R:26:3', 'test-ResamplingSpCVEnv.R:35:3', 'test-autoplot_buffer.R:4:3', 'test-mlr3pipelines-graph-integration.R:3:3', 'test-mlr_sptcv_generic.R:4:3', 'test-mlr_sptcv_generic.R:22:3', 'test-mlr_sptcv_generic.R:38:3', 'test-mlr_sptcv_generic.R:54:3' • mlr3spatial cannot be loaded (1): 'test-helper-DataBackend.R:3:3' • sf cannot be loaded (13): 'test-1-autoplot.R:4:3', 'test-2-autoplot.R:190:3', 'test-ResamplingSpCVBlock.R:84:3', 'test-ResamplingSpCVBlock.R:114:3', 'test-ResamplingSpCVBlock.R:176:3', 'test-TaskClassifST.R:29:3', 'test-TaskClassifST.R:38:3', 'test-TaskClassifST.R:48:3', 'test-TaskClassifST.R:79:3', 'test-TaskClassifST.R:89:3', 'test-TaskRegrST.R:52:3', 'test-as_task.R:21:3', 'test-as_task.R:52:3' • skmeans cannot be loaded (1): 'test-mlr_sptcv_generic.R:70:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-1-autoplot.R:27:3'): plot() works for 'cv' ───────────────────── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─ggplot2::autoplot(plots$rsp, plots$task) at test-1-autoplot.R:27:3 2. └─mlr3spatiotempcv:::autoplot.ResamplingCV(plots$rsp, plots$task) 3. └─mlr3spatiotempcv:::autoplot_spatial(...) 4. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-1-autoplot.R:58:3'): plot() works for 'repeated-cv' ──────────── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─ggplot2::autoplot(plots$rsp, plots$task) at test-1-autoplot.R:58:3 2. └─mlr3spatiotempcv:::autoplot.ResamplingRepeatedCV(plots$rsp, plots$task) 3. └─mlr3spatiotempcv:::autoplot.ResamplingCV(...) 4. └─mlr3spatiotempcv:::autoplot_spatial(...) 5. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-1-autoplot.R:94:3'): plot() works for 'cv' with 'groups' col role ── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─ggplot2::autoplot(cv, task) at test-1-autoplot.R:94:3 2. └─mlr3spatiotempcv:::autoplot.ResamplingCV(cv, task) 3. └─mlr3spatiotempcv:::autoplot_spatial(...) 4. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-1-autoplot.R:117:3'): plot() works for 'custom_cv' ───────────── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─ggplot2::autoplot(rsp, task) at test-1-autoplot.R:117:3 2. └─mlr3spatiotempcv:::autoplot.ResamplingCustomCV(rsp, task) 3. └─mlr3spatiotempcv:::autoplot_custom_cv(...) 4. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-1-autoplot.R:149:3'): plot() works for 'spcv_coords' ─────────── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─ggplot2::autoplot(plots$rsp, plots$task) at test-1-autoplot.R:149:3 2. └─mlr3spatiotempcv:::autoplot.ResamplingSpCVCoords(plots$rsp, plots$task) 3. └─mlr3spatiotempcv:::autoplot_spatial(...) 4. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-1-autoplot.R:170:3'): plot() works for 'repeated_spcv_coords' ── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─ggplot2::autoplot(plots$rsp, plots$task) at test-1-autoplot.R:170:3 2. └─mlr3spatiotempcv:::autoplot.ResamplingRepeatedSpCVCoords(...) 3. └─mlr3spatiotempcv:::autoplot.ResamplingSpCVCoords(...) 4. └─mlr3spatiotempcv:::autoplot_spatial(...) 5. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-2-autoplot.R:93:3'): plot() works for 'sptcv_cstf' ───────────── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-2-autoplot.R:93:3 2. │ └─base::withCallingHandlers(...) 3. ├─ggplot2::autoplot(rsp, tsk_cookfarm_sub, 1, plot3D = TRUE, plot_time_var = "Date") 4. └─mlr3spatiotempcv:::autoplot.ResamplingSptCVCstf(...) 5. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-2-autoplot.R:152:3'): plot() works for 'repeated_spcv_cstf' ──── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-2-autoplot.R:152:3 2. │ └─base::withCallingHandlers(...) 3. ├─ggplot2::autoplot(...) 4. └─mlr3spatiotempcv:::autoplot.ResamplingRepeatedSptCVCstf(...) 5. └─mlr3spatiotempcv:::autoplot.ResamplingSptCVCstf(...) 6. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-2-autoplot.R:224:3'): plot() works for 'spcv_disc' ───────────── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─ggplot2::autoplot(rsp, task = task) at test-2-autoplot.R:224:3 2. └─mlr3spatiotempcv:::autoplot.ResamplingRepeatedSpCVDisc(rsp, task = task) 3. └─mlr3spatiotempcv:::autoplot.ResamplingSpCVDisc(...) 4. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-2-autoplot.R:278:3'): plot() works for 'spcv_tiles' ──────────── <packageNotFoundError/error/condition> Error: The following packages could not be loaded: sf,ggtext Backtrace: ▆ 1. ├─ggplot2::autoplot(rsp, task = task) at test-2-autoplot.R:278:3 2. └─mlr3spatiotempcv:::autoplot.ResamplingRepeatedSpCVTiles(...) 3. └─mlr3spatiotempcv:::autoplot.ResamplingSpCVTiles(...) 4. └─mlr3misc::require_namespaces(c("sf", "patchwork", "ggtext")) ── Error ('test-2-autoplot.R:322:3'): plot() works for 'spcv_knndm' ──────────── <packageNotFoundError/error/condition> Error in `loadNamespace(x)`: there is no package called 'sf' Backtrace: ▆ 1. └─base::loadNamespace(x) at test-2-autoplot.R:322:3 2. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 3. └─base (local) withOneRestart(expr, restarts[[1L]]) 4. └─base (local) doWithOneRestart(return(expr), restart) [ FAIL 11 | WARN 1 | SKIP 74 | PASS 1029 ] Deleting unused snapshots: • 1-autoplot/autoplot-show-blocks-true-show-labels-true.svg • 1-autoplot/custom-cv-all-test-sets.svg • 1-autoplot/custom-cv-fold-1-2-sample-fold-n.svg • 1-autoplot/custom-cv-fold-1-2.svg • 1-autoplot/custom-cv-fold-1-sample-fold-n.svg • 1-autoplot/custom-cv-fold-1.svg • 1-autoplot/custom-cv-sample-fold-n.svg • 1-autoplot/cv-all-test-sets-groups-col-role.svg • 1-autoplot/cv-all-test-sets.svg • 1-autoplot/cv-fold-1-2-groups-col-role.svg • 1-autoplot/cv-fold-1-2-sample-fold-n.svg • 1-autoplot/cv-fold-1-2.svg • 1-autoplot/cv-fold-1-groups-col-role.svg • 1-autoplot/cv-fold-1-sample-fold-n.svg • 1-autoplot/cv-fold-1.svg • 1-autoplot/cv-sample-fold-n.svg • 1-autoplot/repcv-all-test-sets.svg • 1-autoplot/repcv-fold-1-2-rep-1.svg • 1-autoplot/repcv-fold-1-2-rep-2.svg • 1-autoplot/repcv-fold-1-rep-1.svg • 1-autoplot/repcv-fold-1-rep-2.svg • 1-autoplot/repspcvblock-all-test-sets.svg • 1-autoplot/repspcvblock-fold-1-2-rep-1.svg • 1-autoplot/repspcvblock-fold-1-2-rep-2.svg • 1-autoplot/repspcvblock-fold-1-rep-1.svg • 1-autoplot/repspcvblock-fold-1-rep-2.svg • 1-autoplot/repspcvcoords-all-test-sets.svg • 1-autoplot/repspcvcoords-fold-1-2-rep-1.svg • 1-autoplot/repspcvcoords-fold-1-2-rep-2.svg • 1-autoplot/repspcvcoords-fold-1-2-sample-fold-n.svg • 1-autoplot/repspcvcoords-fold-1-rep-1.svg • 1-autoplot/repspcvcoords-fold-1-rep-2.svg • 1-autoplot/repspcvcoords-fold-1-sample-fold-n.svg • 1-autoplot/repspcvcoords-sample-fold-n.svg • 1-autoplot/repspcvenv-all-test-sets.svg • 1-autoplot/repspcvenv-fold-1-2-rep-1.svg • 1-autoplot/repspcvenv-fold-1-2-rep-2.svg • 1-autoplot/repspcvenv-fold-1-rep-1.svg • 1-autoplot/repspcvenv-fold-1-rep-2.svg • 1-autoplot/spcvblock-all-test-sets.svg • 1-autoplot/spcvblock-fold-1-2-sample-fold-n.svg • 1-autoplot/spcvblock-fold-1-2.svg • 1-autoplot/spcvblock-fold-1-sample-fold-n.svg • 1-autoplot/spcvblock-fold-1.svg • 1-autoplot/spcvblock-sample-fold-n.svg • 1-autoplot/spcvcoords-all-test-sets.svg • 1-autoplot/spcvcoords-fold-1-2.svg • 1-autoplot/spcvcoords-fold-1.svg • 1-autoplot/spcvenv-all-test-sets.svg • 1-autoplot/spcvenv-fold-1-2-sample-fold-n.svg • 1-autoplot/spcvenv-fold-1-2.svg • 1-autoplot/spcvenv-fold-1-sample-fold-n.svg • 1-autoplot/spcvenv-fold-1.svg • 1-autoplot/spcvenv-sample-fold-n.svg • 2-autoplot/repspcvdisc-fold-1-2-rep-2.svg • 2-autoplot/repspcvdisc-fold-1-2-sample-fold-n.svg • 2-autoplot/repspcvdisc-fold-1-rep-1-sample-n-fold.svg • 2-autoplot/repspcvdisc-fold-1-rep-2.svg • 2-autoplot/repspcvdisc-fold-1-sample-fold-n.svg • 2-autoplot/repspcvdisc-sample-fold-n.svg • 2-autoplot/repspcvknndm-fold-1-2-rep-2.svg • 2-autoplot/repspcvknndm-fold-1-2-sample-fold-n.svg • 2-autoplot/repspcvknndm-fold-1-rep-1-sample-n-fold.svg • 2-autoplot/repspcvknndm-fold-1-rep-2.svg • 2-autoplot/repspcvknndm-fold-1-sample-fold-n.svg • 2-autoplot/repspcvknndm-sample-fold-n.svg • 2-autoplot/repspcvtiles-all-test-sets.svg • 2-autoplot/repspcvtiles-fold-1-2-rep-2.svg • 2-autoplot/repspcvtiles-fold-1-2-sample-fold-n.svg • 2-autoplot/repspcvtiles-fold-1-2.svg • 2-autoplot/repspcvtiles-fold-1-rep-2.svg • 2-autoplot/repspcvtiles-fold-1-sample-fold-n.svg • 2-autoplot/repspcvtiles-fold-1.svg • 2-autoplot/repspcvtiles-sample-fold-n.svg • 2-autoplot/repspcvtiles-show-omitted.svg • 2-autoplot/repsptcvcstf-2d-space-var-fold-1-2-rep-2.svg • 2-autoplot/repsptcvcstf-2d-space-var-fold-1-rep-2.svg • 2-autoplot/repsptcvcstf-fold-1-2-rep-1.svg • 2-autoplot/repsptcvcstf-fold-1-2-rep-2.svg • 2-autoplot/repsptcvcstf-fold-1-rep-1-sample-fold-n.svg • 2-autoplot/repsptcvcstf-fold-1-rep-1-show-omitted.svg • 2-autoplot/repsptcvcstf-fold-1-rep-2.svg • 2-autoplot/spcvdisc-all-test-sets.svg • 2-autoplot/spcvdisc-fold-1-2.svg • 2-autoplot/spcvdisc-fold-1.svg • 2-autoplot/spcvdisc-show-omitted.svg • 2-autoplot/spcvknndm-all-test-sets.svg • 2-autoplot/spcvknndm-fold-1-2.svg • 2-autoplot/spcvknndm-fold-1.svg • 2-autoplot/sptcvcstf-2d-space-var-all-test-sets.svg • 2-autoplot/sptcvcstf-2d-space-var-fold-1-2.svg • 2-autoplot/sptcvcstf-2d-space-var-fold-1.svg • 2-autoplot/sptcvcstf-2d-time-var-all-test-sets.svg • 2-autoplot/sptcvcstf-2d-time-var-fold-1-2-rep-2.svg • 2-autoplot/sptcvcstf-2d-time-var-fold-1-2-sample-fold-n.svg • 2-autoplot/sptcvcstf-2d-time-var-fold-1-2.svg • 2-autoplot/sptcvcstf-2d-time-var-fold-1-rep-2.svg • 2-autoplot/sptcvcstf-2d-time-var-fold-1-sample-fold-n.svg • 2-autoplot/sptcvcstf-2d-time-var-fold-1.svg • 2-autoplot/sptcvcstf-2d-time-var-sample-fold-n.svg • 2-autoplot/sptcvcstf-3d-time-var-fold-1-2-sample-fold-n.svg • 2-autoplot/sptcvcstf-3d-time-var-fold-1-2.svg • 2-autoplot/sptcvcstf-3d-time-var-fold-1-sample-fold-n.svg • 2-autoplot/sptcvcstf-3d-time-var-fold-1.svg • 2-autoplot/sptcvcstf-omitted-points-3d.svg • autoplot_buffer/spcvbuffer-fold-1-2.svg • autoplot_buffer/spcvbuffer-fold-1.svg Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 2.3.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘mlr3spatiotempcv.Rmd’ using rmarkdown Quitting from lines 51-56 [08-special-spatiotemp-002] (mlr3spatiotempcv.Rmd) Error: processing vignette 'mlr3spatiotempcv.Rmd' failed with diagnostics: there is no package called 'sf' --- failed re-building ‘mlr3spatiotempcv.Rmd’ --- re-building ‘spatiotemp-viz.Rmd’ using rmarkdown Quitting from lines 90-148 [unnamed-chunk-4] (spatiotemp-viz.Rmd) Error: processing vignette 'spatiotemp-viz.Rmd' failed with diagnostics: The following packages could not be loaded: sf,ggtext --- failed re-building ‘spatiotemp-viz.Rmd’ SUMMARY: processing the following files failed: ‘mlr3spatiotempcv.Rmd’ ‘spatiotemp-viz.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64