CRAN Package Check Results for Package circumplex

Last updated on 2023-02-07 09:57:37 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.8 45.22 147.44 192.66 ERROR
r-devel-linux-x86_64-debian-gcc 0.3.8 36.64 105.74 142.38 ERROR
r-devel-linux-x86_64-fedora-clang 0.3.8 258.39 ERROR
r-devel-linux-x86_64-fedora-gcc 0.3.8 249.74 ERROR
r-devel-windows-x86_64 0.3.8 67.00 217.00 284.00 ERROR
r-patched-linux-x86_64 0.3.8 28.52 137.58 166.10 ERROR
r-release-linux-x86_64 0.3.8 30.04 134.06 164.10 ERROR
r-release-macos-arm64 0.3.8 73.00 OK
r-release-macos-x86_64 0.3.8 123.00 OK
r-release-windows-x86_64 0.3.8 105.00 247.00 352.00 OK
r-oldrel-macos-arm64 0.3.8 97.00 OK
r-oldrel-macos-x86_64 0.3.8 99.00 OK
r-oldrel-windows-ix86+x86_64 0.3.8 113.00 236.00 349.00 ERROR

Check Details

Version: 0.3.8
Check: C++ specification
Result: NOTE
     Specified C++11: please update to current default of C++17
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64

Version: 0.3.8
Check: examples
Result: ERROR
    Running examples in ‘circumplex-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: score
    > ### Title: Score circumplex scales from item responses
    > ### Aliases: score
    >
    > ### ** Examples
    >
    > data("raw_iipsc")
    > instrument("iipsc")
    > score(raw_iipsc, IIP01:IIP32, iipsc)
    Error in `mutate()`:
    ℹ In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . =
     ..1) ...`.
    Caused by error in `dplyr::na_if()`:
    ! Can't convert `y` <character> to match type of `x` <double>.
    Backtrace:
     ▆
     1. ├─circumplex::score(raw_iipsc, IIP01:IIP32, iipsc)
     2. │ └─... %>% dplyr::mutate_all(~ dplyr::na_if(., "NaN"))
     3. ├─dplyr::mutate_all(., ~dplyr::na_if(., "NaN"))
     4. │ ├─dplyr::mutate(.tbl, !!!funs)
     5. │ └─dplyr:::mutate.data.frame(.tbl, !!!funs)
     6. │ └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
     7. │ ├─base::withCallingHandlers(...)
     8. │ └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
     9. │ └─mask$eval_all_mutate(quo)
     10. │ └─dplyr (local) eval()
     11. ├─circumplex (local) `<inln_cl_>`(PA)
     12. │ └─rlang::eval_bare(`_quo`, base::parent.frame())
     13. ├─dplyr::na_if(., "NaN")
     14. ├─dplyr::na_if(., "NaN")
     15. │ └─vctrs::vec_cast(x = y, to = x, x_arg = "y", to_arg = "x")
     16. └─vctrs (local) `<fn>`()
     17. └─vctrs::vec_default_cast(...)
     18. ├─base::withRestarts(...)
     19. │ └─base (local) withOneRestart(expr, restarts[[1L]])
     20. │ └─base (local) doWithOneRestart(return(expr), restart)
     21. └─vctrs::stop_incompatible_cast(...)
     22. └─vctrs::stop_incompatible_type(...)
     23. └─vctrs:::stop_incompatible(...)
     24. └─vctrs:::stop_vctrs(...)
     25. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = vctrs_error_call(call))
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.3.8
Check: tests
Result: ERROR
     Running ‘testthat.R’ [19s/22s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     ══ Skipped tests ═══════════════════════════════════════════════════════════════
     • On CRAN (13)
     • getRversion() > 4 is TRUE (4)
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test-tidying_functions.R:29'): score works ──────────────────────────
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.3.8
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘intermediate-ssm-analysis.Rmd’ using rmarkdown
    --- finished re-building ‘intermediate-ssm-analysis.Rmd’
    
    --- re-building ‘introduction-to-ssm-analysis.Rmd’ using rmarkdown
    --- finished re-building ‘introduction-to-ssm-analysis.Rmd’
    
    --- re-building ‘using-instruments.Rmd’ using rmarkdown
    Quitting from lines 135-137 (using-instruments.Rmd)
    Error: processing vignette ‘using-instruments.Rmd’ failed with diagnostics:
    ℹ In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . =
     ..1) ...`.
    Caused by error in `dplyr::na_if()`:
    ! Can't convert `y` <character> to match type of `x` <double>.
    --- failed re-building ‘using-instruments.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘using-instruments.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.3.8
Check: tests
Result: ERROR
     Running ‘testthat.R’ [13s/18s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     ══ Skipped tests ═══════════════════════════════════════════════════════════════
     • On CRAN (13)
     • getRversion() > 4 is TRUE (4)
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test-tidying_functions.R:29'): score works ──────────────────────────
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.3.8
Check: examples
Result: ERROR
    Running examples in ‘circumplex-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: score
    > ### Title: Score circumplex scales from item responses
    > ### Aliases: score
    >
    > ### ** Examples
    >
    > data("raw_iipsc")
    > instrument("iipsc")
    > score(raw_iipsc, IIP01:IIP32, iipsc)
    Error in `mutate()`:
    ℹ In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . =
     ..1) ...`.
    Caused by error in `dplyr::na_if()`:
    ! Can't convert `y` <character> to match type of `x` <double>.
    Backtrace:
     ▆
     1. ├─circumplex::score(raw_iipsc, IIP01:IIP32, iipsc)
     2. │ └─... %>% dplyr::mutate_all(~ dplyr::na_if(., "NaN"))
     3. ├─dplyr::mutate_all(., ~dplyr::na_if(., "NaN"))
     4. │ ├─dplyr::mutate(.tbl, !!!funs)
     5. │ └─dplyr:::mutate.data.frame(.tbl, !!!funs)
     6. │ └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
     7. │ ├─base::withCallingHandlers(...)
     8. │ └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
     9. │ └─mask$eval_all_mutate(quo)
     10. │ └─dplyr (local) eval()
     11. ├─circumplex (local) `<inln_cl_>`(PA)
     12. │ └─rlang::eval_bare(`_quo`, base::parent.frame())
     13. ├─dplyr::na_if(., "NaN")
     14. ├─dplyr::na_if(., "NaN")
     15. │ └─vctrs::vec_cast(x = y, to = x, x_arg = "y", to_arg = "x")
     16. └─vctrs (local) `<fn>`()
     17. └─vctrs::vec_default_cast(...)
     18. ├─base::withRestarts(...)
     19. │ └─base (local) withOneRestart(expr, restarts[[1L]])
     20. │ └─base (local) doWithOneRestart(return(expr), restart)
     21. └─vctrs::stop_incompatible_cast(...)
     22. └─vctrs::stop_incompatible_type(...)
     23. └─vctrs:::stop_incompatible(...)
     24. └─vctrs:::stop_vctrs(...)
     25. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = vctrs_error_call(call))
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.3.8
Check: tests
Result: ERROR
     Running ‘testthat.R’ [22s/42s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     ══ Skipped tests ═══════════════════════════════════════════════════════════════
     • On CRAN (13)
     • getRversion() > 4 is TRUE (4)
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test-tidying_functions.R:29'): score works ──────────────────────────
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.3.8
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
    --- re-building ‘intermediate-ssm-analysis.Rmd’ using rmarkdown
    --- finished re-building ‘intermediate-ssm-analysis.Rmd’
    
    --- re-building ‘introduction-to-ssm-analysis.Rmd’ using rmarkdown
    --- finished re-building ‘introduction-to-ssm-analysis.Rmd’
    
    --- re-building ‘using-instruments.Rmd’ using rmarkdown
    Quitting from lines 135-137 (using-instruments.Rmd)
    Error: processing vignette 'using-instruments.Rmd' failed with diagnostics:
    ℹ In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . =
     ..1) ...`.
    Caused by error in `dplyr::na_if()`:
    ! Can't convert `y` <character> to match type of `x` <double>.
    --- failed re-building ‘using-instruments.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘using-instruments.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.3.8
Check: C++ specification
Result: NOTE
     Specified C++11: please drop specification unless essential
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.3.8
Check: tests
Result: ERROR
     Running ‘testthat.R’ [22s/26s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     ══ Skipped tests ═══════════════════════════════════════════════════════════════
     • On CRAN (13)
     • getRversion() > 4 is TRUE (4)
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test-tidying_functions.R:29'): score works ──────────────────────────
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.3.8
Check: tests
Result: ERROR
     Running 'testthat.R' [21s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     ══ Skipped tests ═══════════════════════════════════════════════════════════════
     • On CRAN (13)
     • getRversion() > 4 is TRUE (4)
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test-tidying_functions.R:29'): score works ──────────────────────────
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-windows-x86_64

Version: 0.3.8
Check: tests
Result: ERROR
     Running ‘testthat.R’ [18s/20s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     ══ Skipped tests ═══════════════════════════════════════════════════════════════
     • On CRAN (13)
     • getRversion() > 4 is TRUE (4)
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test-tidying_functions.R:29'): score works ──────────────────────────
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 0.3.8
Check: tests
Result: ERROR
     Running ‘testthat.R’ [18s/19s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     ══ Skipped tests ═══════════════════════════════════════════════════════════════
     • On CRAN (13)
     • getRversion() > 4 is TRUE (4)
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test-tidying_functions.R:29'): score works ──────────────────────────
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-release-linux-x86_64

Version: 0.3.8
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'circumplex-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: score
    > ### Title: Score circumplex scales from item responses
    > ### Aliases: score
    >
    > ### ** Examples
    >
    > data("raw_iipsc")
    > instrument("iipsc")
    > score(raw_iipsc, IIP01:IIP32, iipsc)
    Error in `mutate()`:
    i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . =
     ..1) ...`.
    Caused by error in `dplyr::na_if()`:
    ! Can't convert `y` <character> to match type of `x` <double>.
    Backtrace:
     x
     1. +-circumplex::score(raw_iipsc, IIP01:IIP32, iipsc)
     2. | \-... %>% dplyr::mutate_all(~ dplyr::na_if(., "NaN"))
     3. +-dplyr::mutate_all(., ~dplyr::na_if(., "NaN"))
     4. | +-dplyr::mutate(.tbl, !!!funs)
     5. | \-dplyr:::mutate.data.frame(.tbl, !!!funs)
     6. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
     7. | +-base::withCallingHandlers(...)
     8. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
     9. | \-mask$eval_all_mutate(quo)
     10. | \-dplyr (local) eval()
     11. +-circumplex (local) `<inln_cl_>`(PA)
     12. | \-rlang::eval_bare(`_quo`, base::parent.frame())
     13. +-dplyr::na_if(., "NaN")
     14. +-dplyr::na_if(., "NaN")
     15. | \-vctrs::vec_cast(x = y, to = x, x_arg = "y", to_arg = "x")
     16. \-vctrs (local) `<fn>`()
     17. \-vctrs::vec_default_cast(...)
     18. +-base::withRestarts(...)
     19. | \-base (local) withOneRestart(expr, restarts[[1L]])
     20. | \-base (local) doWithOneRestart(return(expr), restart)
     21. \-vctrs::stop_incompatible_cast(...)
     22. \-vctrs::stop_incompatible_type(...)
     23. \-vctrs:::stop_incompatible(...)
     24. \-vctrs:::stop_vctrs(...)
     25. \-rlang::abort(message, class = c(class, "vctrs_error"), ..., call = vctrs_error_call(call))
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.3.8
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'circumplex-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: score
    > ### Title: Score circumplex scales from item responses
    > ### Aliases: score
    >
    > ### ** Examples
    >
    > data("raw_iipsc")
    > instrument("iipsc")
    > score(raw_iipsc, IIP01:IIP32, iipsc)
    Error in `mutate()`:
    i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . =
     ..1) ...`.
    Caused by error in `dplyr::na_if()`:
    ! Can't convert `y` <character> to match type of `x` <double>.
    Backtrace:
     x
     1. +-circumplex::score(raw_iipsc, IIP01:IIP32, iipsc)
     2. | \-... %>% dplyr::mutate_all(~ dplyr::na_if(., "NaN"))
     3. +-dplyr::mutate_all(., ~dplyr::na_if(., "NaN"))
     4. | +-dplyr::mutate(.tbl, !!!funs)
     5. | \-dplyr:::mutate.data.frame(.tbl, !!!funs)
     6. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
     7. | +-base::withCallingHandlers(...)
     8. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
     9. | \-mask$eval_all_mutate(quo)
     10. | \-dplyr (local) eval()
     11. +-circumplex (local) `<inln_cl_>`(PA)
     12. | \-rlang::eval_bare(`_quo`, base::parent.frame())
     13. +-dplyr::na_if(., "NaN")
     14. +-dplyr::na_if(., "NaN")
     15. | \-vctrs::vec_cast(x = y, to = x, x_arg = "y", to_arg = "x")
     16. \-vctrs (local) `<fn>`()
     17. \-vctrs::vec_default_cast(...)
     18. +-base::withRestarts(...)
     19. | \-base (local) withOneRestart(expr, restarts[[1L]])
     20. | \-base (local) doWithOneRestart(return(expr), restart)
     21. \-vctrs::stop_incompatible_cast(...)
     22. \-vctrs::stop_incompatible_type(...)
     23. \-vctrs:::stop_incompatible(...)
     24. \-vctrs:::stop_vctrs(...)
     25. \-rlang::abort(message, class = c(class, "vctrs_error"), ..., call = vctrs_error_call(call))
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.3.8
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'testthat.R' [21s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     == Skipped tests ===============================================================
     * On CRAN (13)
     * getRversion() > 4 is TRUE (4)
    
     == Failed tests ================================================================
     -- Error ('test-tidying_functions.R:29'): score works --------------------------
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.3.8
Check: running tests for arch ‘x64’
Result: ERROR
     Running 'testthat.R' [21s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(circumplex)
     >
     > test_check("circumplex")
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
    
     == Skipped tests ===============================================================
     * On CRAN (13)
     * getRversion() > 4 is TRUE (4)
    
     == Failed tests ================================================================
     -- Error ('test-tidying_functions.R:29'): score works --------------------------
     <dplyr:::mutate_error/rlang_error/error/condition>
     Error in `mutate(.tbl, !!!funs)`: i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . = ..1) ...`.
     Caused by error in `dplyr::na_if()`:
     ! Can't convert `y` <character> to match type of `x` <double>.
    
     [ FAIL 1 | WARN 0 | SKIP 17 | PASS 100 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.3.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'intermediate-ssm-analysis.Rmd' using rmarkdown
    --- finished re-building 'intermediate-ssm-analysis.Rmd'
    
    --- re-building 'introduction-to-ssm-analysis.Rmd' using rmarkdown
    --- finished re-building 'introduction-to-ssm-analysis.Rmd'
    
    --- re-building 'using-instruments.Rmd' using rmarkdown
    Quitting from lines 135-137 (using-instruments.Rmd)
    Error: processing vignette 'using-instruments.Rmd' failed with diagnostics:
    i In argument: `PA = (structure(function (..., .x = ..1, .y = ..2, . =
     ..1) ...`.
    Caused by error in `dplyr::na_if()`:
    ! Can't convert `y` <character> to match type of `x` <double>.
    --- failed re-building 'using-instruments.Rmd'
    
    SUMMARY: processing the following file failed:
     'using-instruments.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64