CRAN Package Check Results for Package apcluster

Last updated on 2020-02-27 09:49:27 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4.8 72.05 118.54 190.59 WARN
r-devel-linux-x86_64-debian-gcc 1.4.8 47.02 93.79 140.81 OK
r-devel-linux-x86_64-fedora-clang 1.4.8 241.10 OK
r-devel-linux-x86_64-fedora-gcc 1.4.8 242.77 OK
r-devel-windows-ix86+x86_64 1.4.8 117.00 159.00 276.00 OK
r-devel-windows-ix86+x86_64-gcc8 1.4.8 130.00 173.00 303.00 OK
r-patched-linux-x86_64 1.4.8 52.41 105.45 157.86 OK
r-patched-solaris-x86 1.4.8 237.70 WARN
r-release-linux-x86_64 1.4.8 53.43 106.03 159.46 OK
r-release-windows-ix86+x86_64 1.4.8 126.00 154.00 280.00 OK
r-release-osx-x86_64 1.4.8 WARN
r-oldrel-windows-ix86+x86_64 1.4.8 101.00 149.00 250.00 OK
r-oldrel-osx-x86_64 1.4.8 WARN

Check Details

Version: 1.4.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'apcluster.Rnw' using knitr
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect,
     is.unsorted, lapply, mapply, match, mget, order, paste,
     pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames,
     sapply, setdiff, sort, table, tapply, union, unique,
     unsplit, which, which.max, which.min
    
    
    Attaching package: 'S4Vectors'
    
    The following object is masked from 'package:base':
    
     expand.grid
    
    
    Attaching package: 'Biostrings'
    
    The following object is masked from 'package:base':
    
     strsplit
    
    
    Attaching package: 'kernlab'
    
    The following object is masked from 'package:Biostrings':
    
     type
    
    The following object is masked from 'package:BiocGenerics':
    
     type
    
    
    Attaching package: 'apcluster'
    
    The following object is masked from 'package:stats':
    
     heatmap
    
    Warning in doTryCatch(return(expr), name, parentenv, handler) :
     "nodePar" is not a graphical parameter
    Error: processing vignette 'apcluster.Rnw' failed with diagnostics:
    Running 'texi2dvi' on 'apcluster.tex' failed.
    LaTeX errors:
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    --- failed re-building 'apcluster.Rnw'
    
    SUMMARY: processing the following file failed:
     'apcluster.Rnw'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.4.8
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘kebabs’
Flavors: r-patched-solaris-x86, r-oldrel-osx-x86_64

Version: 1.4.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘apcluster.Rnw’ using knitr
    
    Attaching package: 'apcluster'
    
    The following object is masked from 'package:stats':
    
     heatmap
    
    Quitting from lines 387-408 (apcluster.Rnw)
    Error: processing vignette 'apcluster.Rnw' failed with diagnostics:
    object 'apres2c' not found
    --- failed re-building ‘apcluster.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘apcluster.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-patched-solaris-x86, r-release-osx-x86_64

Version: 1.4.8
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: 'Biostrings', 'kebabs'
Flavor: r-release-osx-x86_64

Version: 1.4.8
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    
    Attaching package: 'apcluster'
    
    The following object is masked from 'package:stats':
    
     heatmap
    
    Quitting from lines 387-408 (apcluster.Rnw)
    Error: processing vignette 'apcluster.Rnw' failed with diagnostics:
    object 'apres2c' not found
    Execution halted
Flavor: r-oldrel-osx-x86_64